PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG012060.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 172aa    MW: 19191 Da    PI: 10.0666
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG012060.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM170.26.4e-53151421128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                       lppGfrFhPtdeel+ +yL++++++ ++++ ++i++vdiyk++PwdLp+++  ++ ewyfFs+rd+ky++g r+nra+ sgyWkatg+dk+++
  TRIDC2AG012060.3  15 LPPGFRFHPTDEELILHYLRNRAAAAPCPV-SIIADVDIYKFDPWDLPSQAVYGDCEWYFFSPRDRKYPNGIRPNRAAGSGYWKATGTDKPIH 106
                       79****************************.89***************76667789************************************* PP

               NAM  94 sk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       +  +g+ vg+kk Lvfykgr pkg+kt W+mheyrl
  TRIDC2AG012060.3 107 DPaTGQGVGVKKALVFYKGRPPKGTKTAWIMHEYRL 142
                       *978888***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    
MAMAQGQGQG AATSLPPGFR FHPTDEELIL HYLRNRAAAA PCPVSIIADV DIYKFDPWDL  60
PSQAVYGDCE WYFFSPRDRK YPNGIRPNRA AGSGYWKATG TDKPIHDPAT GQGVGVKKAL  120
VFYKGRPPKG TKTAWIMHEY RLAADPLTTA VNTYKPIKFR NVSMRVRPSH LL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.12e-73NAC family protein