PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG012470.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 236aa MW: 27328.2 Da PI: 7.8748

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG012470.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	24.4	9.4e-08	14	51	53	90
FAR1 53 rtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +++ + r++C a +++ ++kd+ w++++ + HnH+l+ TRIDC2AG012470.3 14 ENTRSCRCECPALMRLLRSKDNGWYIAEHRDVHNHALT 51 678899******************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 236 aa Download sequence
MMLCLFLQGK PIVENTRSCR CECPALMRLL RSKDNGWYIA EHRDVHNHAL TQTYGQTIHW 60 PSHKHIDVYS RDLVKQLRQN NVSLAKVYSI IGSFFGRMEN VPFTKRALRN LCGKISHEQS 120 EDDVRKTMEV FQELCSKDPQ FTYRVQADSE GRISNLMWAT GNSRLQYNFF GDVVTFDTTY 180 RTNLYDMPFG LFVGVNSHFQ IIILAGVLVK HETVETFEWV FSEFVRIMGG AANNPD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	2e-29	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG012470.3