PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG012470.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 328aa    MW: 37410.5 Da    PI: 8.1481
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG012470.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR140.31e-1264143190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       +fYn Y+ e GF +r  ks+ +  n++  +++ vC + gk+  e+++         + r++C a +++ ++kd+ w++++ +  HnH+l+
  TRIDC2AG012470.5  64 DFYNLYSWEKGFGIRYGKSRLN-VNRTKCMQEIVCGCAGKPIVENTR---------SCRCECPALMRLLRSKDNGWYIAEHRDVHNHALT 143
                       6*****************9998.555578899*******99887555.........99******************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
QMDPKAPGWT QRVRVGAAAE GRAPCSDRVT ALEKTVREFA ETPGDIVIVP KIGTSFDSLG  60
EAYDFYNLYS WEKGFGIRYG KSRLNVNRTK CMQEIVCGCA GKPIVENTRS CRCECPALMR  120
LLRSKDNGWY IAEHRDVHNH ALTQTYGQTI HWPSHKHIDV YSRDLVKQLR QNNVSLAKVY  180
SIIGSFFGRM ENVPFTKRAL RNLCGKISHE QSEDDVRKTM EVFQELCSKD PQFTYRVQAD  240
SEGRISNLMW ATGNSRLQYN FFGDVVTFDT TYRTNLYDMP FGLFVGVNSH FQIIILAGVL  300
VKHETVETFE WVFSEFVRIM GGAANNPD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28530.13e-37FAR1 family protein