PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG015380.10
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HB-other
Protein Properties Length: 250aa    MW: 28457.5 Da    PI: 10.9759
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG015380.10genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox46.65.9e-1554105657
                        S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
           Homeobox   6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 
                        + ++ q++ Le+++ + +yp+ e+ +e A+++gLt +qV++WF+ rR ke++
  TRIDC2AG015380.10  54 KKSPLQIQMLESFYSEVQYPKPEDVTEYAASVGLTYNQVRIWFKERRRKERR 105
                        66899*********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
ALLRPPRPRR AHPAGHSLPP PSPTSPSRRL QLSLHRCLMM AKGFLAKSDN AGTKKSPLQI  60
QMLESFYSEV QYPKPEDVTE YAASVGLTYN QVRIWFKERR RKERRHMEAA EVHMETQASA  120
RSNWPRCSSS RSSNSSQSPM QDTTGHQSYQ DQSVLKKRKI MSPTAQRSTL PFENNDPVRK  180
HGKGKGLMTV WHAMYSQTAE IQDCSSFIDE SGCLRSLRPF EDCGGKLAQR QTLPRKKVNK  240
KSRPPPSKRK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1156185KKRKIMSPTAQRSTLPFENNDPVRKHGKGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G12750.13e-09HB-other family protein