PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG018340.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HSF
Protein Properties Length: 317aa    MW: 34906.2 Da    PI: 7.1783
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG018340.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind111.94.3e-35361282103
                       HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS
      HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 
                       Fl+k+y++++d+ +++++sw e+  +fvv+ + efa+++Lp+yFkh+nf+SFvRQLn+YgF+k+  ++         weF+++ F+kg k+ll
  TRIDC2AG018340.1  36 FLTKTYQLVDDPCTDHIVSWGEDDATFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVADR---------WEFANEFFRKGAKHLL 119
                       9****************************************************************999.........**************** PP

                       XXXXXXXXX CS
      HSF_DNA-bind  95 ekikrkkse 103
                        +i+r+ks+
  TRIDC2AG018340.1 120 AEIHRRKSS 128
                       ******997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
LVERCGEMVV SMEMGSGAAG AHGAGGVAGK PVPAPFLTKT YQLVDDPCTD HIVSWGEDDA  60
TFVVWRPPEF ARDLLPNYFK HNNFSSFVRQ LNTYGFRKIV ADRWEFANEF FRKGAKHLLA  120
EIHRRKSSQP PPPSMVPHQA AYHHHYHLGN TFSPPPPPPP AAHHHHHPVY QHFQEEPAAA  180
ATSHGGGNGG GDFLAALSED NRQLRRRNSL LLSELAHMKK LYNDIIYFLQ NHVAPVTSPS  240
SAALQRHPPL PGAGAGVAAS NSCRLLELDM DVDRDSPAAE EDDTVKLFGV ALHHGKKKRA  300
HREERGDVVA HDLGSEV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G46264.16e-77HSF family protein