PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG019220.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 361aa MW: 38168.2 Da PI: 6.5754

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG019220.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.9	4.1e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l + ++++G+g+W+++++ g+ R++k+c++rw +yl TRIDC2AG019220.1 14 RGLWSPEEDEKLMNHIAKYGNGCWSSVPKIAGLERCGKSCRLRWINYL 61 788*******************************************97 PP
2	Myb_DNA-binding	51.8	1.8e-16	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++++eE++l+++++ lG++ W+ Ia+ ++ gRt++++k++w+++ TRIDC2AG019220.1 67 RGAFSQEEEDLIIHLHSILGNK-WSQIAAQLP-GRTDNEVKNFWNSF 111 89******************.*****.*********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MSKRPGGTKK RLKRGLWSPE EDEKLMNHIA KYGNGCWSSV PKIAGLERCG KSCRLRWINY 60 LRPDLKRGAF SQEEEDLIIH LHSILGNKWS QIAAQLPGRT DNEVKNFWNS FIKKKLRQRG 120 IDPATHKPLA PAGAAAAATP VSRSAVFSEA ELILSSPVGG PHMPPLVSAE SYVYSRGSMD 180 GAGGVVGGCS DDGSLSSLSG YNNNNQTADF AGYLDADALH GAVIPSVSSS STLNSMAGVS 240 PGGVANGNAT DELCCNNNNK NNPSNSGSGF ESSTTQSSSN HHLPWLELGS ISSCTEDGAG 300 AGAAADHYGA ALDELKWSDY VFDGGYPQYH QQGQCIYGDS KAAADAATAQ FDAHGLGINW 360 C

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MSKRPGGTKK RLKRGLWSPE EDEKLMNHIA KYGNGCWSSV PKIAGLERCG KSCRLRWINY  60
LRPDLKRGAF SQEEEDLIIH LHSILGNKWS QIAAQLPGRT DNEVKNFWNS FIKKKLRQRG  120
IDPATHKPLA PAGAAAAATP VSRSAVFSEA ELILSSPVGG PHMPPLVSAE SYVYSRGSMD  180
GAGGVVGGCS DDGSLSSLSG YNNNNQTADF AGYLDADALH GAVIPSVSSS STLNSMAGVS  240
PGGVANGNAT DELCCNNNNK NNPSNSGSGF ESSTTQSSSN HHLPWLELGS ISSCTEDGAG  300
AGAAADHYGA ALDELKWSDY VFDGGYPQYH QQGQCIYGDS KAAADAATAQ FDAHGLGINW  360
C

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G57560.1	3e-70	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG019220.1