PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG019230.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 144aa MW: 16193.5 Da PI: 10.3399

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG019230.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.3	6.2e-17	34	81	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++e+de+l + v+q+G g+W++Ia+ g+ R++k+c++rw yl TRIDC2AG019230.1 34 RGLWSPEDDEKLMNHVAQYGYGCWSSIAKIAGLERCGKSCRLRWMHYL 81 789*****************************************9996 PP
2	Myb_DNA-binding	41.8	2.4e-13	87	129	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g++++ E++l+++++ G++ W+ Ia+ ++ gRt++++k++w++ TRIDC2AG019230.1 87 GPFSQGEEDLIIHLHSIRGNK-WSQIAAQLP-GRTDNEVKNFWNT 129 799****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 144 aa Download sequence
SCTAGNAIEL ESASSQSVGG MSKRPGATKK RLKRGLWSPE DDEKLMNHVA QYGYGCWSSI 60 AKIAGLERCG KSCRLRWMHY LTPDRGGPFS QGEEDLIIHL HSIRGNKWSQ IAAQLPGRTD 120 NEVKNFWNTI IKKKLRQRRI DPAI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G01680.3	6e-58	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG019230.1