PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG019700.9
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 265aa    MW: 28371.7 Da    PI: 9.8884
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG019700.9genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.37.4e-181461148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+WT+eEd+ lv +v+++G+g+W++++ + g+ R+ k+c++rw +yl
  TRIDC2AG019700.9 14 KGPWTPEEDLVLVSYVQEHGPGNWRAVPTRTGLMRCSKSCRLRWTNYL 61
                      79********************************************97 PP
2Myb_DNA-binding51.72e-1667112148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       rg++T +E++l+v++ ++lG++ W++Ia++++  Rt++++k++w+++l
  TRIDC2AG019700.9  67 RGNFTDQEEKLIVHLQALLGNR-WAAIASYLP-ERTDNDIKNYWNTHL 112
                       89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MGRPPCCDKE GVKKGPWTPE EDLVLVSYVQ EHGPGNWRAV PTRTGLMRCS KSCRLRWTNY  60
LRPGIKRGNF TDQEEKLIVH LQALLGNRWA AIASYLPERT DNDIKNYWNT HLKRKLQAGG  120
DAAAKPAAQR PASSSKGQWE RRLQTDINMA RRALREALTT LDDIKRQQPD AADGVNGPAA  180
AGADSGSPAA SSSSAASLSQ CSPSAAGPYV LTTANISRML DGWASKGRSA VPAADSPSGS  240
SASEVSYGSG AAARALGSAF EYDRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62470.24e-88MYB family protein