PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG020010.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 163aa MW: 18738.4 Da PI: 9.7611

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG020010.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	40.6	4.7e-13	65	154	1	99
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 f+k +t+s+++ s +l++p++f +++ ++ + ++ l de+ ++ + + + g+ +++GWk F+ ++L +gD +vF+ ++r++f + TRIDC2AG020010.1 65 FIKPMTHSYATGS-LLTIPRQFKKSYL--PRFDEMIFLVDEEDGEFPMPY--IAQHGA--IGTGWKMFAIGHNLADGDCLVFQQVQRTKF--K 148 8899988888776.6*****99994..456679***********..445444..99*******************7776666..9 PP EEEE-S CS B3 94 vkvfrk 99 v ++r+ TRIDC2AG020010.1 149 VYIIRA 154 999886 PP

Sequence ? help Back to Top
Protein Sequence Length: 163 aa Download sequence
PTRRSGRVAS LPKQPDYRDK KAPRAYVNRR GLPPDRVYAT DEARDYAFTK AKELNNLLSS 60 AHPSFIKPMT HSYATGSLLT IPRQFKKSYL PRFDEMIFLV DEEDGEFPMP YIAQHGAIGT 120 GWKMFAIGHN LADGDCLVFQ QVQRTKFKVY IIRASSYYEK DHC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G42700.1	4e-38	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG020010.1