PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG021390.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 726aa MW: 83802.6 Da PI: 8.0845

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG021390.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	43.6	4.2e-14	59	95	1	35
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C Cg + Tp++Rrgpdg++tLCnaCG+ yrk ++ TRIDC2AG021390.4 59 CLRCGISGnaTPHMRRGPDGPRTLCNACGIAYRKGKM 95 5667777777************************876 PP
2	FAR1	83.7	3.1e-26	129	216	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fYn+YA +vGFsvrks+s+ks++n ++ rtfvCs+eg+++++k+ +++++r tr+gC a+l +k + + k++vt+++ eHnH+lap TRIDC2AG021390.4 129 EFYNKYAGHVGFSVRKSTSHKSSENI-TKVRTFVCSREGYNRDKKSL--EAKKPRLDTRIGCPARLIIKVTPECKYRVTDFKAEHNHQLAP 216 6*******************6666.899*********9988..99***********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 726 aa Download sequence
AKWSCLWAVF QFDADETNSY SPIVQVQLFL LLVLQNWLQF SSMFALIIIL TTFWYLIRCL 60 RCGISGNATP HMRRGPDGPR TLCNACGIAY RKGKMRRMIE AEPPIDEASL AKLVPEVDME 120 FESEEKAYEF YNKYAGHVGF SVRKSTSHKS SENITKVRTF VCSREGYNRD KKSLEAKKPR 180 LDTRIGCPAR LIIKVTPECK YRVTDFKAEH NHQLAPPSTM HMLRSQRILT ELQSGEAELS 240 DDSVVTPTTK ATGDLVVRQV GFLRSISLLP ADYKNYLRSK RTKAMQPGDG GAILKYLQTM 300 QMDNPSFFYT MQIDEDDKLT NFFWADPKSR EDFTYFNDVL CVDTTYKING YGRPLALFLG 360 VNHHRQTIIF GAAMLYDESF ESYKWLFESF KIAMHGKEPA VALIDQSIQL SSAMAAAWPN 420 TAQRVCAWHI YQNSVKHLNQ VFQGSKTFAK DFSKCVFGYE EEEEFVFAWR SMLEKYDLRH 480 NEWLSKLFEE RERWALAYDR HIFCADIISS LQAESFSSIL KKFLSPQLDL LSFFKHYERA 540 VDEHRYAELQ ADFQASQSYP RIPPAKMLKQ TSHTYTPVVF EIFRKEFELF MDSVLFTCGE 600 AGTTSDYKVA PSEKPKEHFV RFNSSDNSCM CTCKKFEFMG ISCCHMLKVL DYRNIKELPQ 660 IYLLKRWRRT AKSTDEDSQG HAANDNRSSL NVSVPSANHH GLQSINARIQ DTSLSNMHEN 720 PFHRSS

Sequence ? help Back to Top

Protein Sequence Length: 726 aa Download sequence

AKWSCLWAVF QFDADETNSY SPIVQVQLFL LLVLQNWLQF SSMFALIIIL TTFWYLIRCL  60
RCGISGNATP HMRRGPDGPR TLCNACGIAY RKGKMRRMIE AEPPIDEASL AKLVPEVDME  120
FESEEKAYEF YNKYAGHVGF SVRKSTSHKS SENITKVRTF VCSREGYNRD KKSLEAKKPR  180
LDTRIGCPAR LIIKVTPECK YRVTDFKAEH NHQLAPPSTM HMLRSQRILT ELQSGEAELS  240
DDSVVTPTTK ATGDLVVRQV GFLRSISLLP ADYKNYLRSK RTKAMQPGDG GAILKYLQTM  300
QMDNPSFFYT MQIDEDDKLT NFFWADPKSR EDFTYFNDVL CVDTTYKING YGRPLALFLG  360
VNHHRQTIIF GAAMLYDESF ESYKWLFESF KIAMHGKEPA VALIDQSIQL SSAMAAAWPN  420
TAQRVCAWHI YQNSVKHLNQ VFQGSKTFAK DFSKCVFGYE EEEEFVFAWR SMLEKYDLRH  480
NEWLSKLFEE RERWALAYDR HIFCADIISS LQAESFSSIL KKFLSPQLDL LSFFKHYERA  540
VDEHRYAELQ ADFQASQSYP RIPPAKMLKQ TSHTYTPVVF EIFRKEFELF MDSVLFTCGE  600
AGTTSDYKVA PSEKPKEHFV RFNSSDNSCM CTCKKFEFMG ISCCHMLKVL DYRNIKELPQ  660
IYLLKRWRRT AKSTDEDSQG HAANDNRSSL NVSVPSANHH GLQSINARIQ DTSLSNMHEN  720
PFHRSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-118	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG021390.4