PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG021900.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YA
Protein Properties Length: 96aa    MW: 11028 Da    PI: 11.7477
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG021900.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA105.73.9e-333793158
         CBFB_NFYA  1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58
                      +ep++VNaKQy++Il+RRq Rakle+++kl  k+rkpylheSRh+hA++R+Rg+gGrF
  TRIDC2AG021900.3 37 EEPMFVNAKQYHAILRRRQIRAKLEAQNKL-VKARKPYLHESRHRHAMKRARGTGGRF 93
                      69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 96 aa     Download sequence    
MLMLGSFQDM PCTLLVHPQL NAATNSRVPL PVELAAEEPM FVNAKQYHAI LRRRQIRAKL  60
EAQNKLVKAR KPYLHESRHR HAMKRARGTG GRFLNT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17887RHRHAMKRAR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.13e-38NF-YA family protein