PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG023120.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C2H2
Protein Properties Length: 258aa    MW: 26982.5 Da    PI: 10.0602
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG023120.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.13.3e-05133155123
                       EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                       y+Cp Cg++Fs+   L  H  +H
  TRIDC2AG023120.4 133 YECPGCGRVFSSYQALGGHRASH 155
                       99***********9999998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MEPLVPAPVA VMAAPPRRRR RSMRVAAPAP APPPPMLSAF EKEQEDVALC LLMLSRDTTG  60
GMRGSPAPKQ AHLPRNGYGY NSDDDSALFQ YGDAKTKSVA KSKKRRTSHY ALNSASPKQR  120
GEAAPPPAKR TRYECPGCGR VFSSYQALGG HRASHKRINT SCSAPKAAPA AAPAPEPSVD  180
TYTSFGTLSP SASPDSVAIG IGAGSSKKPA AGEAEKFECP VCFRVFGSGQ ALGGHKRSHI  240
IADAAFSSDG ELYGSASV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45120.14e-20C2H2 family protein