PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG023430.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 175aa MW: 19654.3 Da PI: 9.6998

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG023430.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.9	0.00071	54	76	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C + F ++ L H++ H TRIDC2AG023430.2 54 FSCNYCLRKFFSSQALGGHQNAH 76 89*****************9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 175 aa Download sequence
MKRAPEAEEQ KLASQGDEAG RADNSTPTPW LKLGLDALRS EEAKPPEATP QRTFSCNYCL 60 RKFFSSQALG GHQNAHKKER CAARRSRSFQ QLMIRFPPAA SFIQPMRASP HSTILTAQGE 120 RAAVVVARFH DGQMRNRMPF AVEEAAYFVW PGSFKASLQE PMKQPEENID LSLHL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G24625.1	1e-22	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG023430.2