PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG024050.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 644aa MW: 68834.7 Da PI: 4.9783

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG024050.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.6	1.1e-05	57	79	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ Cgk F r nL+ H r H TRIDC2AG024050.2 57 FVCEVCGKGFQRDQNLQLHRRGH 79 89*******************88 PP
2	zf-C2H2	15.9	3.8e-05	136	157	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 Cp Cgk++ + +Lk H +t+ TRIDC2AG024050.2 136 ACPRCGKRYAVQADLKAHAKTC 157 6******************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 644 aa Download sequence
AAPDRPGMPP NPTEPEQPEA AATPAPPKKK RNLPGTPDPD AEVIALSPGT LMATNRFVCE 60 VCGKGFQRDQ NLQLHRRGHN LPWRLRQRGP GAAPPRRRVY VCPEPGCVHH SPARALGDLT 120 GIKKHFCRKH GEKRWACPRC GKRYAVQADL KAHAKTCGTR EYRCDCGTLF TRRDSFVTHR 180 AFCGALVEET GRVLAVPAPP SPRPPDLEEV EENVDKDKEK EEENVDKHKE KEDEGDKGGE 240 DENETSAVAE VDEPQHVEAA MEEPQPQRIP SSPSPTPPSP APQEQQPMVA VVPNLDEPVV 300 VVEPIVDIKQ EEEDKRDEDV CFQEADKYDV AELEDSNLPD NDTPMPPCFL PSPSDAIGTD 360 GSSTSCGTVS SASNSIAPAT TTSTFAGLFA SATTSTTPQS RSLRDLIGVD PTFLCLAIGT 420 PSSLFPQTDA SNPGNFAPPP APHISATALL QKAAEAGASQ AGTSFLKEFG LASSSSSTPS 480 RPPQGRFIES SSTQSQQPQG SGLPQSRLPQ GRYIDNSPQA KLPQGGRFVD SNPQQWHQRS 540 NNHNQLMDME PGPMVSGSLG LGLAYEGSNP RLPDLMMGQS PLFGPKPATL DFLGLGIGGT 600 MGGSTASGGL PALMVGGELD MGSAAQPPSP WEEAQRKTNG RTIL

Sequence ? help Back to Top

Protein Sequence Length: 644 aa Download sequence

AAPDRPGMPP NPTEPEQPEA AATPAPPKKK RNLPGTPDPD AEVIALSPGT LMATNRFVCE  60
VCGKGFQRDQ NLQLHRRGHN LPWRLRQRGP GAAPPRRRVY VCPEPGCVHH SPARALGDLT  120
GIKKHFCRKH GEKRWACPRC GKRYAVQADL KAHAKTCGTR EYRCDCGTLF TRRDSFVTHR  180
AFCGALVEET GRVLAVPAPP SPRPPDLEEV EENVDKDKEK EEENVDKHKE KEDEGDKGGE  240
DENETSAVAE VDEPQHVEAA MEEPQPQRIP SSPSPTPPSP APQEQQPMVA VVPNLDEPVV  300
VVEPIVDIKQ EEEDKRDEDV CFQEADKYDV AELEDSNLPD NDTPMPPCFL PSPSDAIGTD  360
GSSTSCGTVS SASNSIAPAT TTSTFAGLFA SATTSTTPQS RSLRDLIGVD PTFLCLAIGT  420
PSSLFPQTDA SNPGNFAPPP APHISATALL QKAAEAGASQ AGTSFLKEFG LASSSSSTPS  480
RPPQGRFIES SSTQSQQPQG SGLPQSRLPQ GRYIDNSPQA KLPQGGRFVD SNPQQWHQRS  540
NNHNQLMDME PGPMVSGSLG LGLAYEGSNP RLPDLMMGQS PLFGPKPATL DFLGLGIGGT  600
MGGSTASGGL PALMVGGELD MGSAAQPPSP WEEAQRKTNG RTIL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G03840.1	3e-92	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG024050.2