PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG024050.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 750aa MW: 80851.1 Da PI: 5.195

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG024050.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.4	1.3e-05	62	84	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ Cgk F r nL+ H r H TRIDC2AG024050.3 62 FVCEVCGKGFQRDQNLQLHRRGH 84 89******************988 PP
2	zf-C2H2	15.6	4.5e-05	141	162	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 Cp Cgk++ + +Lk H +t+ TRIDC2AG024050.3 141 ACPRCGKRYAVQADLKAHAKTC 162 6******************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 750 aa Download sequence
MPPNPTEPEQ PEAAATPAPP KKKRNLPGTP GESARFGFCG VVDPDAEVIA LSPGTLMATN 60 RFVCEVCGKG FQRDQNLQLH RRGHNLPWRL RQRGPGAAPP RRRVYVCPEP GCVHHSPARA 120 LGDLTGIKKH FCRKHGEKRW ACPRCGKRYA VQADLKAHAK TCGTREYRCD CGTLFTRRDS 180 FVTHRAFCGA LVEETGRVLA VPAPPSPRPP DLEEVEENVD KDKEKEEENV DKHKEKEDEG 240 DKGGEDENET SAVAEVDEPQ HVEAAMEEPQ PQRIPSSPSP TPPSPAPQEQ QPMVAVVPNL 300 DEPVVVVEPI VDIKQEEEDK RDEDVCFQEA DKYDVAELED SNLPDNDTPM PPCFLPSPSD 360 AIGTDGSSTS CGTVSSASNS IAPATTTSTF AGLFASATTS TTPQSRSLRD LIGVDPTFLC 420 LAIGTPSSLF PQTDASNPGN FAPPPAPHIS ATALLQKAAE AGASQAGTSF LKEFGLASSS 480 SSTPSRPPQG RFIESSSTQS QQPQGFIDSS TQFRLPQDRY INNSMPSKLS QGRFMDTSLP 540 SQQLLPQGRF FDNSPASNLS QGRFFDNSQP SNPTQGRFFI NSPPSNLPHG RFPDYSTPGR 600 LPQGMYIDGL PQSRLPQGRY IDNSPQAKLP QGGRFVDSNP QQWHQRSNNH NQLMDMEPGP 660 MVSGSLGLGL AYEGSNPRLP DLMMGQSPLF GPKPATLDFL GLGIGGTMGG STASGGLPAL 720 MVGGELDMGS AAQPPSPWEE AQRKTNGRTI

Sequence ? help Back to Top

Protein Sequence Length: 750 aa Download sequence

MPPNPTEPEQ PEAAATPAPP KKKRNLPGTP GESARFGFCG VVDPDAEVIA LSPGTLMATN  60
RFVCEVCGKG FQRDQNLQLH RRGHNLPWRL RQRGPGAAPP RRRVYVCPEP GCVHHSPARA  120
LGDLTGIKKH FCRKHGEKRW ACPRCGKRYA VQADLKAHAK TCGTREYRCD CGTLFTRRDS  180
FVTHRAFCGA LVEETGRVLA VPAPPSPRPP DLEEVEENVD KDKEKEEENV DKHKEKEDEG  240
DKGGEDENET SAVAEVDEPQ HVEAAMEEPQ PQRIPSSPSP TPPSPAPQEQ QPMVAVVPNL  300
DEPVVVVEPI VDIKQEEEDK RDEDVCFQEA DKYDVAELED SNLPDNDTPM PPCFLPSPSD  360
AIGTDGSSTS CGTVSSASNS IAPATTTSTF AGLFASATTS TTPQSRSLRD LIGVDPTFLC  420
LAIGTPSSLF PQTDASNPGN FAPPPAPHIS ATALLQKAAE AGASQAGTSF LKEFGLASSS  480
SSTPSRPPQG RFIESSSTQS QQPQGFIDSS TQFRLPQDRY INNSMPSKLS QGRFMDTSLP  540
SQQLLPQGRF FDNSPASNLS QGRFFDNSQP SNPTQGRFFI NSPPSNLPHG RFPDYSTPGR  600
LPQGMYIDGL PQSRLPQGRY IDNSPQAKLP QGGRFVDSNP QQWHQRSNNH NQLMDMEPGP  660
MVSGSLGLGL AYEGSNPRLP DLMMGQSPLF GPKPATLDFL GLGIGGTMGG STASGGLPAL  720
MVGGELDMGS AAQPPSPWEE AQRKTNGRTI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G03840.1	2e-88	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG024050.3