PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG024080.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HD-ZIP

Protein Properties

Length: 237aa MW: 25730.7 Da PI: 7.6003

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG024080.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.7	9.8e-19	59	112	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t+eq++ Le F+++r++ + ++ +LA++lgL+ +qV vWFqNrRa++k TRIDC2AG024080.1 59 KKRRLTDEQVHGLELSFREERKLETGRKVHLAAELGLDPKQVAVWFQNRRARHK 112 45689***********************************************99 PP
2	HD-ZIP_I/II	114.1	8.9e-37	59	148	2	91
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 kkrrl++eqv+ LE sF+ee+kLe+ rKv+la eLgl+p+qvavWFqnrRAR+k+k +E+++++Lk+a+da ++++Le+e +L+e+l TRIDC2AG024080.1 59 KKRRLTDEQVHGLELSFREERKLETGRKVHLAAELGLDPKQVAVWFQNRRARHKSKLMEEEFAKLKHAHDAAILHKCHLENELLRLKERL 148 9**************************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
SMDKQQVFGS SYVDMPFFAA NGTAQGESRP RARRRRRRAA RCGGGDGDGG DMDGGGDPKK 60 RRLTDEQVHG LELSFREERK LETGRKVHLA AELGLDPKQV AVWFQNRRAR HKSKLMEEEF 120 AKLKHAHDAA ILHKCHLENE LLRLKERLGA TEEEVRRLRS AAGSHGASGN GGDAADAVGA 180 CGGSPSSSFS TGTCQQHPGF SGAGQLGPDD ELMMCVPEYG GYADSSVVEW FSLYGLI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	29	38	RPRARRRRRR
2	33	38	RRRRRR
3	33	41	RRRRRRAAR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36740.1	1e-29	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG024080.1