PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG024710.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 153aa    MW: 16784.6 Da    PI: 4.2458
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG024710.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS108.59.2e-3418152245374
              GRAS 245 eadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqa 337
                       e   +++ Fl+ f e l+++sa +dsle+++p++s+er  +Er   gr+iv++v+c  +e+ er+et++ W +rl++aGF+pvp+se++a+++
  TRIDC2AG024710.3  18 EGGDTEAAFLKVFGEGLRFFSAYMDSLEESFPKTSNERLALERG-AGRAIVDLVSCPASESMERRETAAAWARRLRSAGFSPVPFSEDVADDV 109
                       44456789************************************.************************************************ PP

              GRAS 338 klllrkvksdgyrveee.......sgslvlgWkdrpLvsvSaWr 374
                       ++llr++  +g+++ e         + ++l Wk++pLv++SaWr
  TRIDC2AG024710.3 110 RSLLRRYR-EGWSMREAgtddsaaGAGVFLAWKEQPLVWASAWR 152
                       ********.88888866666666455566**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    
VVEEEADLVA TDADASDEGG DTEAAFLKVF GEGLRFFSAY MDSLEESFPK TSNERLALER  60
GAGRAIVDLV SCPASESMER RETAAAWARR LRSAGFSPVP FSEDVADDVR SLLRRYREGW  120
SMREAGTDDS AAGAGVFLAW KEQPLVWASA WRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37650.11e-43GRAS family protein