PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG024890.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 231aa MW: 23373.2 Da PI: 9.6817

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG024890.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11	0.0013	101	123	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ Cgk++ + L H +H TRIDC2AG024890.1 101 YECSVCGKVYASYQALGGHKTSH 123 99********9999998887776 PP

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence
STLRRGRSPP AMSPDDVSRK SPVPPPSPPP MDSWARGGRR SRPRGGGGSG SASSGGAAES 60 EEEYLALSLL MLSRGVRGEV EDGGFGGVKG VGAAPTKAQG YECSVCGKVY ASYQALGGHK 120 TSHRKPPTPP AASAGGDEAS GGAPVEAKVH QCSLCHRTFP SGQALGGHKR LHYEGGAAGA 180 GTGKDKEAAK AKAAALLRDF DLNLPASGVA GDEAESPPPE AKRARLMLLA I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49930.1	5e-22	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG024890.1