PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG024960.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family LBD
Protein Properties Length: 77aa    MW: 8147.43 Da    PI: 8.8127
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG024960.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26050.46.6e-161776155
            DUF260  1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeere 55
                      +C++C+vlr++C++ Cvl+p++     +++q +++ +++k+FG++ ++++l+a+pe++r+
  TRIDC2AG024960.2 17 SCNGCRVLRKGCNDACVLRPCLlwieaADAQGHATLFAAKFFGRAGLMSFLTAVPEQQRP 76
                      6*********************9998666778**************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 77 aa     Download sequence    
MRGSERAAVS ASTSGMSCNG CRVLRKGCND ACVLRPCLLW IEAADAQGHA TLFAAKFFGR  60
AGLMSFLTAV PEQQRPG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67420.13e-34LBD family protein