PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG024960.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

LBD

Protein Properties

Length: 221aa MW: 23767.4 Da PI: 10.4931

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG024960.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	31.9	3.7e-10	64	105	56	97
DUF260 56 damsslvyeAearardPvyGavgvilklqqqleqlkaelall 97 ++++sl+yeA r+ +Pv+Gavg++++++++l++++++++l+ TRIDC2AG024960.3 64 AVFQSLLYEAAGRTINPVSGAVGLLWAGSWHLCEAAVQTVLR 105 689********************************9998776 PP

Sequence ? help Back to Top
Protein Sequence Length: 221 aa Download sequence
RRQVLRPRRP HVLPHRCPRA AAPRYVRTEG RSMVFFLARR FIGSTIYVDL LWLMFAWCLL 60 WVAAVFQSLL YEAAGRTINP VSGAVGLLWA GSWHLCEAAV QTVLRGGAIR PLPELAGGVP 120 EGGVGGSDLF ASSSRRAVVG CSTYSAAKRV TPRKTWAPEA ASQHQEPPCD LGLFLTPGSA 180 AAAEGERRVR RAGTPSMSSD GSVTTSAGAG EKEPELLNLF V

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G67420.1	4e-21	LBD family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG024960.3