PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG024980.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 469aa    MW: 50784 Da    PI: 5.712
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG024980.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS303.93.9e-93764662373
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar..svselykalppsetseknsseelaalkl..fsevsPi 90 
                       ++lL++cA+a++++d++l+q++L+ l+++a  dgd++qRl+a f+ AL ar +r   ++ + +a+++  +s   + ++++a++l  f++++P+
  TRIDC2AG024980.1  76 EQLLVHCANAIEANDATLTQQILWVLNNIAPADGDSNQRLTAAFLCALVARASRtgACKAVTAAVAAAVESAALHLHRFTAVELasFVDLTPW 168
                       79***************************************************933344444444444444344666666666689******* PP

              GRAS  91 lkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg....skeeleetgerLakfAeelgvpfefn 179
                       ++f++++aN+aIleaveg + vH++D++ ++++Q p+L++ LasR+egpp lR+T+ +   sg       ++ e+g +L +fA++ +v+++f+
  TRIDC2AG024980.1 169 HRFGYMAANHAILEAVEGFSVVHVVDLSTTHCMQMPTLIDMLASRAEGPPILRLTVADVGCSGpppaLDMSYDELGAKLVNFARSRNVTMDFR 261
                       *******************************************************888766667666788899******************** PP

              GRAS 180 vl.......vakrledleleeLrvkpgEalaVnlvlqlhrlldesvsles......erdevLklvkslsPkvvvvveqeadhnsesFlerfle 259
                       ++       +++ +++l++++L  +  Eal+Vn+++ lh+++de++ + s       r+ +Lk +++l P++vvv+e++ad ++++ + r+  
  TRIDC2AG024980.1 262 MVptspadaLTSLVDQLRVQQLVSDGTEALIVNCHMLLHTVPDETAGSVSltqsvsLRTMLLKSIRTLDPTLVVVAEEDADFTAGDVVGRLRA 354
                       **877666555566677777777777****************9987666655466678899******************************** PP

              GRAS 260 aleyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve 352
                       a+++ +  +d++++ lp+ se+r+++E+e +g++++nv+a+eg +r+er+e  ++W +r++ aGF++v+++e+aa +++++l++++  g+ ++
  TRIDC2AG024980.1 355 AFNFLWIPYDAVDTFLPKGSEQRRWYEAE-VGWKVENVLAQEGVDRVERQEDRARWGQRMRGAGFRAVAFGEEAAGEIRTMLNEHA-AGWGMK 445
                       *****************************.********************************************************.889999 PP

              GRAS 353 eesgslvlgWkdrpLvsvSaW 373
                        e++ l+l+Wk++++v++SaW
  TRIDC2AG024980.1 446 REDDDLMLTWKGHNVVFASAW 466
                       ********************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 469 aa     Download sequence    
SIPPTSRPPY MMQFTHAAVT APPLYPNGHH GLGLGLFLDV GAPRARPWPA AGSLFPTLPP  60
SSKISLGNLN SAGCMEQLLV HCANAIEAND ATLTQQILWV LNNIAPADGD SNQRLTAAFL  120
CALVARASRT GACKAVTAAV AAAVESAALH LHRFTAVELA SFVDLTPWHR FGYMAANHAI  180
LEAVEGFSVV HVVDLSTTHC MQMPTLIDML ASRAEGPPIL RLTVADVGCS GPPPALDMSY  240
DELGAKLVNF ARSRNVTMDF RMVPTSPADA LTSLVDQLRV QQLVSDGTEA LIVNCHMLLH  300
TVPDETAGSV SLTQSVSLRT MLLKSIRTLD PTLVVVAEED ADFTAGDVVG RLRAAFNFLW  360
IPYDAVDTFL PKGSEQRRWY EAEVGWKVEN VLAQEGVDRV ERQEDRARWG QRMRGAGFRA  420
VAFGEEAAGE IRTMLNEHAA GWGMKREDDD LMLTWKGHNV VFASAWAPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49950.11e-161GRAS family protein