PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG025560.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C2H2
Protein Properties Length: 292aa    MW: 31999.2 Da    PI: 8.5869
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG025560.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.70.00019265286323
                       ETTTTEEESSHHHHHHHHHH.T CS
           zf-C2H2   3 CpdCgksFsrksnLkrHirt.H 23 
                       Cp+C+k F ++ +L+ H  + H
  TRIDC2AG025560.2 265 CPKCSKGFQDPVLLVEHVEReH 286
                       *****************99888 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
RFRRAMGTPE FPDLGRHCSV GDCHQIDFLP FTCDRCDFVF CLQHRSHTSH KCPKANNKDV  60
TVVVCPLCAK GVRLNPNEDA NITWESHVNT DCDPSNYQRA TKKKKCPVPG CREQLTFSNT  120
IMCKDCSKEH CLKHRFGPDH KCPGPRKPEP TFPFANMLRR SQKVEPRANS SGSGSSWWSS  180
SLLNAASSFR SSAEAGMQKL SIATSEAVQK AKDGVTPSSS GGGLVEQCVQ CPARFSTVGA  240
LIEHAEKSHG NNSQPSRGKV TIDACPKCSK GFQDPVLLVE HVEREHGGTS KA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41835.11e-116C2H2 family protein