PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG025800.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 450aa    MW: 48988.8 Da    PI: 6.6181
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG025800.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS361.99.1e-111704332374
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                        +lLl+cAeav+ ++l +aq +L+++ elasp g++ +R+aayf  AL ar+++s  + y+ l+ ++ +  +s +  +a+++++ +sP++kfs
  TRIDC2AG025800.2  70 LRLLLRCAEAVAMDQLPEAQDMLQEVAELASPFGSSPERVAAYFGDALCARVLSSYLGAYSPLALRPLAAAQSRRISSAFQAYNALSPLVKFS 162
                       689******************************************************************99********************** PP

              GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrle 187
                       h+taN+aIl+a++ge++vH+iD+di+qGlQWp L++ LasRp+ p slR+Tg+g+    s + le+tg+rLa+fA++lg+pfef+++  k  +
  TRIDC2AG025800.2 163 HFTANKAILQALDGEDHVHVIDLDIMQGLQWPGLFHMLASRPRRPLSLRVTGLGA----SLDVLEATGRRLADFAASLGLPFEFQPIDGKIGH 251
                       *******************************************************....9**************************8555445 PP

              GRAS 188 dleleeL...rvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                         ++ +L   r +++Ea++V++++  h l+d ++s       +++l+ksl+Pk++++veq++ h s++Fl rf+eal+yysalfd+l  ++++
  TRIDC2AG025800.2 252 VADTTALlgpRHRHREATVVHWMH--HCLYDVTGSDVG----TVRLLKSLRPKLITIVEQDLGH-SGDFLGRFVEALHYYSALFDALRDGAGA 337
                       55666664556666*********9..889988999998....**********************.899*******************9999** PP

              GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsv 370
                       ++eer+ vEr+llg ei+n+va  g +r+ + + +e+W + l++aGF+pv+l  + a+qa+ll+ +++++gy++ ee+g+l lgWkd +L+++
  TRIDC2AG025800.2 338 AEEERHAVERQLLGAEIRNIVAVGGPKRTGEVR-VERWGDELRRAGFRPVSLAGSPAAQARLLIGMYPWKGYTLVEEDGCLKLGWKDLSLLTA 429
                       ***************************998887.9********************************************************** PP

              GRAS 371 SaWr 374
                       S+W+
  TRIDC2AG025800.2 430 SSWE 433
                       ***5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 450 aa     Download sequence    
MIQGVLSRAP ATDAMKAKQA ASMPDDEEKA RGKRLQLHGS ASEQGLAVAA AGEEGERVAE  60
APETRGLRLL RLLLRCAEAV AMDQLPEAQD MLQEVAELAS PFGSSPERVA AYFGDALCAR  120
VLSSYLGAYS PLALRPLAAA QSRRISSAFQ AYNALSPLVK FSHFTANKAI LQALDGEDHV  180
HVIDLDIMQG LQWPGLFHML ASRPRRPLSL RVTGLGASLD VLEATGRRLA DFAASLGLPF  240
EFQPIDGKIG HVADTTALLG PRHRHREATV VHWMHHCLYD VTGSDVGTVR LLKSLRPKLI  300
TIVEQDLGHS GDFLGRFVEA LHYYSALFDA LRDGAGAAEE ERHAVERQLL GAEIRNIVAV  360
GGPKRTGEVR VERWGDELRR AGFRPVSLAG SPAAQARLLI GMYPWKGYTL VEEDGCLKLG  420
WKDLSLLTAS SWEPTEDDHA AVAEQKRHDS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41920.11e-159GRAS family protein