PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG026000.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 400aa MW: 42973.2 Da PI: 8.1238

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG026000.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	172.5	1.3e-53	32	160	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeelvv+yLkkk+++ +l++ ++i+evd+yk++Pw+Lp+k++ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk++l TRIDC2AG026000.3 32 LPPGFRFHPTDEELVVHYLKKKAAKVPLPV-TIIAEVDLYKFDPWELPEKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPIL 123 79**************************.89***********988899************************************* PP NAM 94 sk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ ++e+vg+kk Lvfy+g+ pkg kt+W+mheyrl TRIDC2AG026000.3 124 ASgcGREKVGVKKALVFYRGKPPKGLKTNWIMHEYRL 160 9999999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 400 aa Download sequence
MRSMGSSDSS SGSAPPRHQP PPPPQQGSAP DLPPGFRFHP TDEELVVHYL KKKAAKVPLP 60 VTIIAEVDLY KFDPWELPEK ATFGEQEWYF FSPRDRKYPN GARPNRAATS GYWKATGTDK 120 PILASGCGRE KVGVKKALVF YRGKPPKGLK TNWIMHEYRL TDASSSATTS RPPPVTGGSR 180 AASLRLDDWV LCRIYKKINK AAAGDQQRSM ECEDSVEDAV TAYPPYATAG MTGAGAHGSN 240 YDSLLHHLDS HEDNFLDGLL TAEDAGLSAG ATSLSHLAAA ARASPAPTKQ FLAPSSSTPF 300 NWLDASTVGI LPQARNFPGF NRSRNVGNMS LSSTADMAVD NGGGNAINAM PPFMNHLPVQ 360 DGTYHQQHVI LGTPLAPEAT AAATSAFQHP VQISGVNWNP

Sequence ? help Back to Top

Protein Sequence Length: 400 aa Download sequence

MRSMGSSDSS SGSAPPRHQP PPPPQQGSAP DLPPGFRFHP TDEELVVHYL KKKAAKVPLP  60
VTIIAEVDLY KFDPWELPEK ATFGEQEWYF FSPRDRKYPN GARPNRAATS GYWKATGTDK  120
PILASGCGRE KVGVKKALVF YRGKPPKGLK TNWIMHEYRL TDASSSATTS RPPPVTGGSR  180
AASLRLDDWV LCRIYKKINK AAAGDQQRSM ECEDSVEDAV TAYPPYATAG MTGAGAHGSN  240
YDSLLHHLDS HEDNFLDGLL TAEDAGLSAG ATSLSHLAAA ARASPAPTKQ FLAPSSSTPF  300
NWLDASTVGI LPQARNFPGF NRSRNVGNMS LSSTADMAVD NGGGNAINAM PPFMNHLPVQ  360
DGTYHQQHVI LGTPLAPEAT AAATSAFQHP VQISGVNWNP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15510.1	6e-90	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG026000.3