PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG026360.11
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 384aa    MW: 42835.8 Da    PI: 9.0819
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG026360.11genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR186.83.2e-27111198190
               FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                        +fYn YA++vGF vr+s+  ++++n  it+rtfvCs+eg+re++k + ++++ +r+etr+gC a+++++++ +gk+++t+++ +HnH+la
  TRIDC2AG026360.11 111 EFYNIYAEKVGFFVRRSTLWTTSKNI-ITRRTFVCSREGFREKKKGA-KESKCPRPETRIGCPASMTIRLTPNGKYRLTEFVPNHNHQLA 198
                        6********************97766.****************9999.9999************************************97 PP
2FAR183.43.8e-26240326189
               FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                        +fY+ YA ++GF+vr+++++ +  ++ it+r fvCskeg+re+++ + ++ +++r+etrtgC a++++++ ++gk++vt++++ HnH l
  TRIDC2AG026360.11 240 EFYSMYAGKIGFNVRRASMTIN-AENVITRRMFVCSKEGFREKKRGA-SRVKKPRPETRTGCPACMVIRLASNGKYNVTEFVTFHNHGL 326
                        6*****************9999.5556****************9998.99*************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 384 aa     Download sequence    
MSSNSGGGAK EKGSRIAMPP VPPPLVQNSM PTASDAPTTD LRLAQQSWPG HVVLRPCTSW  60
PPHVNPAYPQ QNGEAVADVV AADVLPVINS CNEKMLPEVN MLFDDENDAY EFYNIYAEKV  120
GFFVRRSTLW TTSKNIITRR TFVCSREGFR EKKKGAKESK CPRPETRIGC PASMTIRLTP  180
NGKYRLTEFV PNHNHQLATA STIHMLKAKK IRRKARAVRE NLVDDTVVTP EFENEDEAYE  240
FYSMYAGKIG FNVRRASMTI NAENVITRRM FVCSKEGFRE KKRGASRVKK PRPETRTGCP  300
ACMVIRLASN GKYNVTEFVT FHNHGLGAAA ASDLVMTSLA AGSYQDCGVD LYDESLDDCY  360
GKQNLIKEDA TSNCLEGRSW KSKI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-18FAR1 family protein