PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG026360.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 848aa MW: 96186.3 Da PI: 8.03

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG026360.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	69	1.2e-21	74	152	10	90
FAR1 10 vGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 vGF vr+s+ ++++n it+rtfvCs+eg+re++k + ++++ +r+etr+gC a+++++++ +gk+++t+++ +HnH+la TRIDC2AG026360.4 74 VGFFVRRSTLWTTSKNI-ITRRTFVCSREGFREKKKGA-KESKCPRPETRIGCPASMTIRLTPNGKYRLTEFVPNHNHQLA 152 8*********97766.************9999.9999**********************************97 PP
2	FAR1	81.7	1.3e-25	194	280	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 +fY+ YA ++GF+vr+++++ + ++ it+r fvCskeg+re+++ + ++ +++r+etrtgC a++++++ ++gk++vt++++ HnH l TRIDC2AG026360.4 194 EFYSMYAGKIGFNVRRASMTIN-AENVITRRMFVCSKEGFREKKRGA-SRVKKPRPETRTGCPACMVIRLASNGKYNVTEFVTFHNHGL 280 6***************9999.5556************9998.99***********************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 848 aa Download sequence
MSSNSGGGAK EKGSRIAMPP VPPPLVQNSM PTASDAPTTD LRLAQQSWPG HVVLRPCTSW 60 PPHVNPAYPQ QNGVGFFVRR STLWTTSKNI ITRRTFVCSR EGFREKKKGA KESKCPRPET 120 RIGCPASMTI RLTPNGKYRL TEFVPNHNHQ LATASTIHML KAKKIRRKAR AVRENLVDDT 180 VVTPEFENED EAYEFYSMYA GKIGFNVRRA SMTINAENVI TRRMFVCSKE GFREKKRGAS 240 RVKKPRPETR TGCPACMVIR LASNGKYNVT EFVTFHNHGL GAAAASDLVM TSLAAGSYQD 300 CGVDLYDESL DDCYGKQNLI KEDATSNCLE GRSWKRYKCK VPHYGDVGAT LEYLQKMQHD 360 NPSFFYAVKS DEDGNLTNFL WADSKSIMDF THFGDVVCLD SGYAVQGYGR PIALFTGLNH 420 HRQTVIFGTA LLYDESFEAF RWLFDTFKMA MNSTHPKTLL TDRSAVISEA VAVSWPETAH 480 RFCVWQIYQN ALQQLSQAFH GSRTLEYNFK RCLFDCEDEA EFLMAWREML ENHDLKDNQW 540 LADLLAVKEK WALPYGREAF YADMKSVQQK DNLSSELKIY LSLEFDLLSF FVQFEKLLCD 600 RRSAELQLDV SASQSTKKPP SMRILRQAAN VYTPAAYRMF EREFELYMDC MLYNCGEMGT 660 ICEYRITVED NPKDHFVKYD SLNSMSHCSC KRFEFVGIPC RHMLKVLDTR NIKDIPPQYI 720 LKRWRKDARS GSSNGGYAYS FDGDPQTKRH TLLCRIFSIA AARAATSAES FAYMESQSSI 780 LMGQVEQFLE NSPPDIAAII GANCDRTQIP VESMITDGLH NHANFINGSA DDSLTFPFTM 840 GAGTLDYR

Sequence ? help Back to Top

Protein Sequence Length: 848 aa Download sequence

MSSNSGGGAK EKGSRIAMPP VPPPLVQNSM PTASDAPTTD LRLAQQSWPG HVVLRPCTSW  60
PPHVNPAYPQ QNGVGFFVRR STLWTTSKNI ITRRTFVCSR EGFREKKKGA KESKCPRPET  120
RIGCPASMTI RLTPNGKYRL TEFVPNHNHQ LATASTIHML KAKKIRRKAR AVRENLVDDT  180
VVTPEFENED EAYEFYSMYA GKIGFNVRRA SMTINAENVI TRRMFVCSKE GFREKKRGAS  240
RVKKPRPETR TGCPACMVIR LASNGKYNVT EFVTFHNHGL GAAAASDLVM TSLAAGSYQD  300
CGVDLYDESL DDCYGKQNLI KEDATSNCLE GRSWKRYKCK VPHYGDVGAT LEYLQKMQHD  360
NPSFFYAVKS DEDGNLTNFL WADSKSIMDF THFGDVVCLD SGYAVQGYGR PIALFTGLNH  420
HRQTVIFGTA LLYDESFEAF RWLFDTFKMA MNSTHPKTLL TDRSAVISEA VAVSWPETAH  480
RFCVWQIYQN ALQQLSQAFH GSRTLEYNFK RCLFDCEDEA EFLMAWREML ENHDLKDNQW  540
LADLLAVKEK WALPYGREAF YADMKSVQQK DNLSSELKIY LSLEFDLLSF FVQFEKLLCD  600
RRSAELQLDV SASQSTKKPP SMRILRQAAN VYTPAAYRMF EREFELYMDC MLYNCGEMGT  660
ICEYRITVED NPKDHFVKYD SLNSMSHCSC KRFEFVGIPC RHMLKVLDTR NIKDIPPQYI  720
LKRWRKDARS GSSNGGYAYS FDGDPQTKRH TLLCRIFSIA AARAATSAES FAYMESQSSI  780
LMGQVEQFLE NSPPDIAAII GANCDRTQIP VESMITDGLH NHANFINGSA DDSLTFPFTM  840
GAGTLDYR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-105	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG026360.4