PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG026430.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 790aa MW: 87735.5 Da PI: 7.7567

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG026430.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	58.1	1.6e-18	287	386	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f+k l+ sd+++ grlvlpkk+ae++ ++++e+ l+++d sg++W +++++ +++s++yvl+ G ++ +L++gD+v F++++ e TRIDC2AG026430.3 287 FEKMLSASDAGRIGRLVLPKKCAEAYfpPISQPEGLPLKVQDASGKEWVFQFRFwpNNNSRMYVLE-GVTPCIQSMHLQAGDTVSFSRID-PE 377 89************************555566778***********99899999999.*******************987.67 PP E..EEEEE- CS B3 90 felvvkvfr 98 ++lv+++++ TRIDC2AG026430.3 378 GKLVMGFRK 386 767777665 PP

Sequence ? help Back to Top
Protein Sequence Length: 790 aa Download sequence
AAPSQMWSTP TVHMPQNVAD RKDSYVKSWR PPTGQISSQW RQNHQLWNMS TIQSDLQQRL 60 AYEFDRPSGS EKLPPGRTFI HAQEKKSDDM HDRPTTPAGM GQIIRDRYAN GLGQQTSMDP 120 THSSTPYQRE GPNPNSLHDP SHHVGESDPL SSRKGIISDG GSTVSTGFKL DSHHPSILKD 180 DAASTLPTMG GYTITNYPPV PGRSDHLRII PNNPQQPPTT VPLSVVQKQF YSHSVIEPNY 240 QAQFRNGKPR MDPKARSELL PRYWPRITDK ELQHLSGDSN SVITPLFEKM LSASDAGRIG 300 RLVLPKKCAE AYFPPISQPE GLPLKVQDAS GKEWVFQFRF WPNNNSRMYV LEGVTPCIQS 360 MHLQAGDTVS FSRIDPEGKL VMGFRKTKTQ EQIFRQEEPT KPANAAPNLP DVNVNVSAPD 420 SSPNSSLARP NKVNTENKDS SPVEQAASKI DKGGVAQKEG PGTVRTSPGP VKRKATSIGP 480 KIKRFRIDNE ESMELKITWE EAQELLRPPL KAPSVVIVDG HEFEEYEEPP VLGRKTYFVT 540 DQSGENHQWA QCEDCSKWRK LPVDALLPSK WTCSDNKWDP ERTTCVSPQE ASMEELAELI 600 PIKAGAAKKA KLRMDTDSID VSDGLDTLAN LAILGEGESL PSQPTTKHPR HRPGCSCIVC 660 IQPPSGKGPK HKQTCTCNVC MTVRRRFRTL MLRREKRASE KESEEPPRKK EQGQSSESPQ 720 DPLPASTSPT STPQKVNGNG DDAEEAVEHS MASSPMKNQI DLNIQPERED EQSPKSDAVG 780 AMRLARENAA

Sequence ? help Back to Top

Protein Sequence Length: 790 aa Download sequence

AAPSQMWSTP TVHMPQNVAD RKDSYVKSWR PPTGQISSQW RQNHQLWNMS TIQSDLQQRL  60
AYEFDRPSGS EKLPPGRTFI HAQEKKSDDM HDRPTTPAGM GQIIRDRYAN GLGQQTSMDP  120
THSSTPYQRE GPNPNSLHDP SHHVGESDPL SSRKGIISDG GSTVSTGFKL DSHHPSILKD  180
DAASTLPTMG GYTITNYPPV PGRSDHLRII PNNPQQPPTT VPLSVVQKQF YSHSVIEPNY  240
QAQFRNGKPR MDPKARSELL PRYWPRITDK ELQHLSGDSN SVITPLFEKM LSASDAGRIG  300
RLVLPKKCAE AYFPPISQPE GLPLKVQDAS GKEWVFQFRF WPNNNSRMYV LEGVTPCIQS  360
MHLQAGDTVS FSRIDPEGKL VMGFRKTKTQ EQIFRQEEPT KPANAAPNLP DVNVNVSAPD  420
SSPNSSLARP NKVNTENKDS SPVEQAASKI DKGGVAQKEG PGTVRTSPGP VKRKATSIGP  480
KIKRFRIDNE ESMELKITWE EAQELLRPPL KAPSVVIVDG HEFEEYEEPP VLGRKTYFVT  540
DQSGENHQWA QCEDCSKWRK LPVDALLPSK WTCSDNKWDP ERTTCVSPQE ASMEELAELI  600
PIKAGAAKKA KLRMDTDSID VSDGLDTLAN LAILGEGESL PSQPTTKHPR HRPGCSCIVC  660
IQPPSGKGPK HKQTCTCNVC MTVRRRFRTL MLRREKRASE KESEEPPRKK EQGQSSESPQ  720
DPLPASTSPT STPQKVNGNG DDAEEAVEHS MASSPMKNQI DLNIQPERED EQSPKSDAVG  780
AMRLARENAA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	1e-144	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG026430.3