PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG026450.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HSF
Protein Properties Length: 493aa    MW: 54211 Da    PI: 6.1998
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG026450.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind110.41.3e-34751672103
                       HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS
      HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 
                       Fl+k+y+++++++l+ +isw   gnsfvv+++++fa++vLp+ Fkh+nf+SFvRQLn+YgF+kv+ ++         weF+h+ F +g+k+ll
  TRIDC2AG026450.3  75 FLSKTYNLVSEPQLDGVISWGPAGNSFVVWNPSTFARDVLPHNFKHNNFSSFVRQLNTYGFRKVHADR---------WEFAHEGFLRGSKHLL 158
                       9****************************************************************999.........**************** PP

                       XXXXXXXXX CS
      HSF_DNA-bind  95 ekikrkkse 103
                       ++i r++s+
  TRIDC2AG026450.3 159 KTIVRRRSS 167
                       *****9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 493 aa     Download sequence    
GTNTTPAAVI ASASMDAALL LEPKLEMMLQ QQPSPAGHYA ALDHHLVPPP PALVVPCEPP  60
RPLEALLQGP QLPPFLSKTY NLVSEPQLDG VISWGPAGNS FVVWNPSTFA RDVLPHNFKH  120
NNFSSFVRQL NTYGFRKVHA DRWEFAHEGF LRGSKHLLKT IVRRRSSPTQ QSSLQPGSSI  180
FRKIQSSSSG ESTLDPELHS LRREKNALLQ EVARLKEEHN QTIEHMNALN QRLETAEDRQ  240
KQVVSFLAKL LRNPDFLRQL KMHRERRDGI DSARVKRKFL KHVLHGSRNS GDSNSPRTAE  300
STCSPAHPVA HDAIADLQSF LLEDTDLSDG MLPGNFGLDG VEASDDIGAL VQVFDQQDLG  360
TGAELLGIPP VPGAAHCQDP TFGRSKGKNV MCPGGTDGTS SQADCLVPLP GNVGKLMDAD  420
GEQIWGANTF FQSSCSGTSQ QTYVSDPYLM EIPDKPERFW ELDFDALDDG DLHLDKCVIG  480
DPALEQHRGN MKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03720.11e-69HSF family protein