PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG027600.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 215aa    MW: 24293.6 Da    PI: 8.0106
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG027600.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR163.94.5e-2042122190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       +fYn+Y+ evGF ++  +++++k     t+++f Cs+eg+++ee++k         + rt+Cka++++k++ d+ w+ ++++l HnHela
  TRIDC2AG027600.1  42 EFYNAYSWEVGFGIKWGNKYTTKPACYKTMQEFLCSCEGSNKEENTK---------SARTKCKAMVRLKRTADDGWYFSTVVLTHNHELA 122
                       6****************************************997666.........9*******************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MEGGGRTNSI QRAFSLAAER GSPVVFEPAV GMVFSSEQEA HEFYNAYSWE VGFGIKWGNK  60
YTTKPACYKT MQEFLCSCEG SNKEENTKSA RTKCKAMVRL KRTADDGWYF STVVLTHNHE  120
LADTAGEKKV WKCHNTIDSS IKELIKHMRS NNIPVNKVYG VMSDIHGCHE EVPFGKRCLK  180
NLCATLVHDS SLDDITKTLD IFSKMQAQNP DFFTR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18960.11e-14FAR1 family protein