PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG027900.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 189aa    MW: 21141 Da    PI: 5.1008
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG027900.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.44.7e-122166555
                      HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                      +  +ErrRR r+N+ + +Lr ++P+      +K+sK ++L  A+ +Ik+Lq
  TRIDC2AG027900.1 21 NLDAERRRRGRLNTNILKLRAVVPNI-----TKMSKESTLADAIGHIKKLQ 66
                      5579*********************7.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
EESEEGEQLP AADATQYKSK NLDAERRRRG RLNTNILKLR AVVPNITKMS KESTLADAIG  60
HIKKLQNQVL ELQSQLADSP GEAWEKQGSA SCSESLAPTD NIHYQGQVEL IPLGSCKYNL  120
KIFWTKRAGL FTKVLEALCN YNVQVLSLNT ITYYGYAESF FCIEVKGEQD VVMVELRDLL  180
SSIVEVPSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21330.11e-21bHLH family protein