PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG032100.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GRF

Protein Properties

Length: 183aa MW: 20024.7 Da PI: 9.223

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG032100.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	72.1	6.4e-23	94	134	1	41
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrk 41 ++epgrCrRtDGKkWRC+r++++++k+CErH+hrgr+r + TRIDC2AG032100.3 94 EPEPGRCRRTDGKKWRCWRKTIPNEKYCERHMHRGRKRPVQ 134 69***********************************9765 PP
2	QLQ	54.9	2.6e-19	28	63	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FTa+Qlq+L++Q +y+y+aa++PvP +L+++i+k TRIDC2AG032100.3 28 SFTAMQLQELEQQSRVYQYMAARVPVPTHLVFPIWK 63 8*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 183 aa Download sequence
PLHSVATAAL QEEMRALFAS VPEGAGASFT AMQLQELEQQ SRVYQYMAAR VPVPTHLVFP 60 IWKSVTGASS EGAQNYPTLM GLATLCLDFG KSPEPEPGRC RRTDGKKWRC WRKTIPNEKY 120 CERHMHRGRK RPVQVIVEDD EPDSASGSKS SSGKVTEGGK KTDDKSSSSK KLAVAAPAAV 180 EFT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	4e-31	GRF family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG032100.3