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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | TRIDC2AG032170.10 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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| Family | FAR1 | ||||||||
| Protein Properties | Length: 834aa MW: 92482.8 Da PI: 7.662 | ||||||||
| Description | FAR1 family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | FAR1 | 69.5 | 8.3e-22 | 39 | 140 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk............tekerrtraetrtgCkaklkvkkek.dgkwevt 79
+fY++YA ++GF vrks+++k++r++ +t+r fvCsk+g+r+e kk ++ + + +rtgC a+l++k+ + ++vt
TRIDC2AG032170.10 39 EFYKAYAARLGFVVRKSNKSKNSRHT-VTRRLFVCSKQGFRQEPKKPqdetnatdvtvaASPPPPRCPDSRTGCLASLTIKLLPsANAFRVT 129
6*****************99997666.****************99996666666655443344448899*************99899***** PP
FAR1 80 kleleHnHela 90
+++ eHnH+la
TRIDC2AG032170.10 130 EFVAEHNHPLA 140
*********97 PP
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| 2 | FAR1 | 69.4 | 8.9e-22 | 186 | 285 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.............tekerrtraetrtgCkaklkvkkekdgkwevtk 80
fYn+YA++vGFsvr+s++k++ +g i++r fvCs+eg +++ k++ r + trtgC+a++++k + +++v+k
TRIDC2AG032170.10 186 FYNRYAEHVGFSVRRSYKKRK--HGVIVSRIFVCSREGVSDRAKHDglasisanagggaPGPPRPGPPPTRTGCQARMVIKITPCRTYRVAK 275
9*************9976655..9******************99999****999999987778888999*********************** PP
FAR1 81 leleHnHela 90
+ eHnH+la
TRIDC2AG032170.10 276 FIAEHNHPLA 285
********97 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 834 aa Download sequence |
ALLGQATSTS TPSAAGDDAA VPSSPQMGMY FETEDDAYEF YKAYAARLGF VVRKSNKSKN 60 SRHTVTRRLF VCSKQGFRQE PKKPQDETNA TDVTVAASPP PPRCPDSRTG CLASLTIKLL 120 PSANAFRVTE FVAEHNHPLA SAVSAVAMIP SSSSHHTIAA AASLPDPRDG PRPEMHFETE 180 DDAYAFYNRY AEHVGFSVRR SYKKRKHGVI VSRIFVCSRE GVSDRAKHDG LASISANAGG 240 GAPGPPRPGP PPTRTGCQAR MVIKITPCRT YRVAKFIAEH NHPLANSETV HKLRSHKMRA 300 RGHELGPGEL HRRKQGKGVQ LGDAGAALEY LEGLQVGNPS LYYAVGMAPD GNLAVNFFWA 360 DAKSIIDFRS FGDVVCFDTT YGLNVYGRPF ALFVGVDNHK QLLVLGAALL YDDGIQSLKW 420 VFQAFDDAMR DRQPKTILID ERSECAIAAA EVWPGSNHCT SVWHIYHSSK RHLKQVFESS 480 KSFGNALSQC LFDCEDEMEF LSAWEKLIEK HDIGESEWLS RLFLEKEKWA LPYRRTVFSA 540 DILSTLRKDS MINELKRELN EQEDILLFFK RYETMLEEHR SKKLQADVDG NQVTLPIPSL 600 RMLKQSSNAY TPEAFKMFQG EFEAYMNCMS FPCSAVGTVS EYKITLDEKP SDAIVKFDAL 660 DGLATCSCRK FESVGIQCCH VLKVLDLKNI KELPEQYILK RWRKDARSVR MGEEPNCGSS 720 SIMRSSLDVR FSNMCRMVSL IASRAAKSEE AMSYIESQSS VLLKHLDEIL QTSYPENGNH 780 DVASSSQAIS FVGNHPDHTT QARAVADTAN GTDILVGNFC LSSSGQLKGS VGSL |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT4G38180.1 | 7e-84 | FAR1 family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | TRIDC2AG032170.10 |




