PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG032170.11
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 829aa    MW: 92000.2 Da    PI: 7.662
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG032170.11genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR169.58.2e-2234135190
               FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk............tekerrtraetrtgCkaklkvkkek.dgkwevt 79 
                        +fY++YA ++GF vrks+++k++r++ +t+r fvCsk+g+r+e kk             ++    + + +rtgC a+l++k+    + ++vt
  TRIDC2AG032170.11  34 EFYKAYAARLGFVVRKSNKSKNSRHT-VTRRLFVCSKQGFRQEPKKPqdetnatdvtvaASPPPPRCPDSRTGCLASLTIKLLPsANAFRVT 124
                        6*****************99997666.****************99996666666655443344448899*************99899***** PP

               FAR1  80 kleleHnHela 90 
                        +++ eHnH+la
  TRIDC2AG032170.11 125 EFVAEHNHPLA 135
                        *********97 PP
2FAR169.48.8e-22181280290
               FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.............tekerrtraetrtgCkaklkvkkekdgkwevtk 80 
                        fYn+YA++vGFsvr+s++k++  +g i++r fvCs+eg +++ k++                 r   + trtgC+a++++k +   +++v+k
  TRIDC2AG032170.11 181 FYNRYAEHVGFSVRRSYKKRK--HGVIVSRIFVCSREGVSDRAKHDglasisanagggaPGPPRPGPPPTRTGCQARMVIKITPCRTYRVAK 270
                        9*************9976655..9******************99999****999999987778888999*********************** PP

               FAR1  81 leleHnHela 90 
                        +  eHnH+la
  TRIDC2AG032170.11 271 FIAEHNHPLA 280
                        ********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 829 aa     Download sequence    
ATSTSTPSAA GDDAAVPSSP QMGMYFETED DAYEFYKAYA ARLGFVVRKS NKSKNSRHTV  60
TRRLFVCSKQ GFRQEPKKPQ DETNATDVTV AASPPPPRCP DSRTGCLASL TIKLLPSANA  120
FRVTEFVAEH NHPLASAVSA VAMIPSSSSH HTIAAAASLP DPRDGPRPEM HFETEDDAYA  180
FYNRYAEHVG FSVRRSYKKR KHGVIVSRIF VCSREGVSDR AKHDGLASIS ANAGGGAPGP  240
PRPGPPPTRT GCQARMVIKI TPCRTYRVAK FIAEHNHPLA NSETVHKLRS HKMRARGHEL  300
GPGELHRRKQ GKGVQLGDAG AALEYLEGLQ VGNPSLYYAV GMAPDGNLAV NFFWADAKSI  360
IDFRSFGDVV CFDTTYGLNV YGRPFALFVG VDNHKQLLVL GAALLYDDGI QSLKWVFQAF  420
DDAMRDRQPK TILIDERSEC AIAAAEVWPG SNHCTSVWHI YHSSKRHLKQ VFESSKSFGN  480
ALSQCLFDCE DEMEFLSAWE KLIEKHDIGE SEWLSRLFLE KEKWALPYRR TVFSADILST  540
LRKDSMINEL KRELNEQEDI LLFFKRYETM LEEHRSKKLQ ADVDGNQVTL PIPSLRMLKQ  600
SSNAYTPEAF KMFQGEFEAY MNCMSFPCSA VGTVSEYKIT LDEKPSDAIV KFDALDGLAT  660
CSCRKFESVG IQCCHVLKVL DLKNIKELPE QYILKRWRKD ARSVRMGEEP NCGSSSIMRS  720
SLDVRFSNMC RMVSLIASRA AKSEEAMSYI ESQSSVLLKH LDEILQTSYP ENGNHDVASS  780
SQAISFVGNH PDHTTQARAV ADTANGTDIL VGNFCLSSSG QLKGSVGSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.19e-84FAR1 family protein