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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | TRIDC2AG032170.6 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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| Family | FAR1 | ||||||||
| Protein Properties | Length: 879aa MW: 96860.5 Da PI: 7.3694 | ||||||||
| Description | FAR1 family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | FAR1 | 69.4 | 8.9e-22 | 104 | 205 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk............tekerrtraetrtgCkaklkvkkek.dgkwevtk 80
+fY++YA ++GF vrks+++k++r++ +t+r fvCsk+g+r+e kk ++ + + +rtgC a+l++k+ + ++vt+
TRIDC2AG032170.6 104 EFYKAYAARLGFVVRKSNKSKNSRHT-VTRRLFVCSKQGFRQEPKKPqdetnatdvtvaASPPPPRCPDSRTGCLASLTIKLLPsANAFRVTE 195
6*****************99997666.****************99996666666655443344448899*************99899****** PP
FAR1 81 leleHnHela 90
++ eHnH+la
TRIDC2AG032170.6 196 FVAEHNHPLA 205
********97 PP
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| 2 | FAR1 | 69.3 | 9.6e-22 | 251 | 350 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.............tekerrtraetrtgCkaklkvkkekdgkwevtkl 81
fYn+YA++vGFsvr+s++k++ +g i++r fvCs+eg +++ k++ r + trtgC+a++++k + +++v+k+
TRIDC2AG032170.6 251 FYNRYAEHVGFSVRRSYKKRK--HGVIVSRIFVCSREGVSDRAKHDglasisanagggaPGPPRPGPPPTRTGCQARMVIKITPCRTYRVAKF 341
9*************9976655..9******************99999****999999987778888999************************ PP
FAR1 82 eleHnHela 90
eHnH+la
TRIDC2AG032170.6 342 IAEHNHPLA 350
*******97 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 879 aa Download sequence |
PPQPIHPTSS SSSGCSPPSF LQTLAQTLMS TTAHPPASLS GDSSPTTSGS SSPSSSAAVA 60 GSEEPALLGQ ATSTSTPSAA GDDAAVPSSP QMGMYFETED DAYEFYKAYA ARLGFVVRKS 120 NKSKNSRHTV TRRLFVCSKQ GFRQEPKKPQ DETNATDVTV AASPPPPRCP DSRTGCLASL 180 TIKLLPSANA FRVTEFVAEH NHPLASAVSA VAMIPSSSSH HTIAAAASLP DPRDGPRPEM 240 HFETEDDAYA FYNRYAEHVG FSVRRSYKKR KHGVIVSRIF VCSREGVSDR AKHDGLASIS 300 ANAGGGAPGP PRPGPPPTRT GCQARMVIKI TPCRTYRVAK FIAEHNHPLA NSETVHKLRS 360 HKMRARGHEL GPGELHRRKQ GKGVQLGDAG AALEYLEGLQ VGNPSLYYAV GMAPDGNLAV 420 NFFWADAKSI IDFRSFGDVV CFDTTYGLNV YGRPFALFVG VDNHKQLLVL GAALLYDDGI 480 QSLKWVFQAF DDAMRDRQPK TILIDERSEC AIAAAEVWPG SNHCTSVWHI YHSSKRHLKQ 540 VFESSKSFGN ALSQCLFDCE DEMEFLSAWE KLIEKHDIGE SEWLSRLFLE KEKWALPYRR 600 TVFSADILST LRKDSMINEL KRELNEQEDI LLFFKRYETM LEEHRSKKLQ ADVDGNQVTL 660 PIPSLRMLKQ SSNAYTPEAF KMFQGEFEAY MNCMSFPCSA VGTVSEYKIT LDEKPSDAIV 720 KFDALDGLAT CSCRKFESVG IQCCHVLKVL DLKNIKELPE QYILKRWRKD ARSVRMGEEP 780 NCGSSSIMRS SLDVRFSNMC RMVSLIASRA AKSEEAMSYI ESQSSVLLKH LDEILQTSYP 840 ENGNHDVASS SQAISFVGNH PDHTTQARAV ADTANGIMF |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT4G38180.1 | 3e-83 | FAR1 family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | TRIDC2AG032170.6 |




