PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG032220.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 411aa MW: 46685.6 Da PI: 7.9528

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG032220.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	66.1	9.4e-21	117	204	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 +fY +Y+ + GF ++++++++ +g +++tf Csk g+++ ++ +++ ++ t+tgCkak+ vk + +++wev+ leleHnH+l p TRIDC2AG032220.7 117 QFYVTYGCRSGFGITRRSNNTF--DGFRYRSTFICSKGGQSRMRSGV--TRHARKRGTKTGCKAKIIVKDAHfQNRWEVIVLELEHNHPLEP 204 6**************99988..9999*********999877..77777889***********9**************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 411 aa Download sequence
PMHLFCLNRN PTPLFRSTPP SSHRIWTADR LLDDSSANPR ATEKSLVQPR SACRIYYLGP 60 MEEEGYSTES SNEGDTQEDG DKEKNLAEGD VFKPVHMDPE WIPKVGMVFD SEEDTFQFYV 120 TYGCRSGFGI TRRSNNTFDG FRYRSTFICS KGGQSRMRSG VTRHARKRGT KTGCKAKIIV 180 KDAHFQNRWE VIVLELEHNH PLEPSSIKYK KHLENIPFSL NPPRLSEAPQ SSSLVGYSSS 240 FGDSGIPSSA QIEIKTKIDR NRKLKIAEGD LEALVSFFND MQDRNPCFFH SLDVNEQGQL 300 RNVFWADAKS RSSYNYFGDV VAINVTNFSD QYDIQFMSFV GTNHHAQPLL LGCGLLAGRS 360 LGAYVWLFDT WLRCMNATSP PSIITHYCHD VAIAVKKVFP NSRHPFCLWH I

Sequence ? help Back to Top

Protein Sequence Length: 411 aa Download sequence

PMHLFCLNRN PTPLFRSTPP SSHRIWTADR LLDDSSANPR ATEKSLVQPR SACRIYYLGP  60
MEEEGYSTES SNEGDTQEDG DKEKNLAEGD VFKPVHMDPE WIPKVGMVFD SEEDTFQFYV  120
TYGCRSGFGI TRRSNNTFDG FRYRSTFICS KGGQSRMRSG VTRHARKRGT KTGCKAKIIV  180
KDAHFQNRWE VIVLELEHNH PLEPSSIKYK KHLENIPFSL NPPRLSEAPQ SSSLVGYSSS  240
FGDSGIPSSA QIEIKTKIDR NRKLKIAEGD LEALVSFFND MQDRNPCFFH SLDVNEQGQL  300
RNVFWADAKS RSSYNYFGDV VAINVTNFSD QYDIQFMSFV GTNHHAQPLL LGCGLLAGRS  360
LGAYVWLFDT WLRCMNATSP PSIITHYCHD VAIAVKKVFP NSRHPFCLWH I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	2e-50	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG032220.7