PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG033700.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

YABBY

Protein Properties

Length: 146aa MW: 16424.4 Da PI: 9.4811

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG033700.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	146.6	2.5e-45	3	124	23	159
YABBY 23 avsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsseklsenedeevprvppv 115 +v+vP+++ +++v vrCGhCt++ls++l ++q+ +a++h ++++ +v +n s++++ ++++ ++++ + +n+++ +p TRIDC2AG033700.1 3 IVNVPNNCYYNIVNVRCGHCTMVLSMDLGPFHQASTAQEH--------QVQN-RVVLNNSGSYDSAARNQR-AMPMYPMVNNQQQVSP----- 80 69**********************************98........3444.444455566666666554.5677788888888887..... PP YABBY 116 irPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaakn 159 i+PPekrq vPsaynrfikeeiqrik+snP+ishreafs+aakn TRIDC2AG033700.1 81 IHPPEKRQHVPSAYNRFIKEEIQRIKSSNPEISHREAFSTAAKN 124 89***************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 146 aa Download sequence
CKIVNVPNNC YYNIVNVRCG HCTMVLSMDL GPFHQASTAQ EHQVQNRVVL NNSGSYDSAA 60 RNQRAMPMYP MVNNQQQVSP IHPPEKRQHV PSAYNRFIKE EIQRIKSSNP EISHREAFST 120 AAKNPRGQVC SYADASAGRG RPANYH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08465.1	8e-33	YABBY family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG033700.1