PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG035600.15
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 197aa    MW: 21922.1 Da    PI: 9.3764
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG035600.15genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH56.74.3e-184490455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                        hn+ Er+RRdriN+++  L+el+P++      K +Ka+iL +A+eY+ksLq
  TRIDC2AG035600.15 44 VHNQSERKRRDRINEKMKALQELVPHC-----NKSDKASILDEAIEYLKSLQ 90
                       6*************************8.....6******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
QALLSKRGRD ELGSRREDAD DCEAVNETRP QRPAAKRRTR AAEVHNQSER KRRDRINEKM  60
KALQELVPHC NKSDKASILD EAIEYLKSLQ LQVQIMWMAT GMAPMMYPGA HQLMPPMAMG  120
LNSACMPVAQ SLSQLQRVAP FMNHHLPNQM PRVQSPAMDS LNVGNNGVCG EPRNPFLHPG  180
NTLTAASQVT TTQLVSS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13653KRRTRAAEVHNQSERKRR
24954ERKRRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20180.17e-34bHLH family protein