PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG035600.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 236aa    MW: 25749.2 Da    PI: 7.5433
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG035600.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH56.25.9e-1861107455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        hn+ Er+RRdriN+++  L+el+P++      K +Ka+iL +A+eY+ksLq
  TRIDC2AG035600.4  61 VHNQSERKRRDRINEKMKALQELVPHC-----NKSDKASILDEAIEYLKSLQ 107
                       6*************************8.....6******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
ALLPSPEEEP GSSSAGGQAL LSKRGRDELG SRREDADDCE AVNETRPQRP AAKRRTRAAE  60
VHNQSERKRR DRINEKMKAL QELVPHCNKS DKASILDEAI EYLKSLQLQV QIMWMATGMA  120
PMMYPGAHQL MPPMAMGLNS ACMPVAQSLS QLQRVAPFMN HHLPNQMPRV QSPAMDSLNV  180
GNNGVCGEPR NPFLHPGNTL TAASQAQQNQ NHQLLPNTDM PASGPCPPSF ADGTGT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15370KRRTRAAEVHNQSERKRR
26671ERKRRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20180.11e-33bHLH family protein