PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG035600.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 215aa MW: 24241.9 Da PI: 9.1033

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG035600.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	56.5	5.1e-18	27	73	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn+ Er+RRdriN+++ L+el+P++ K +Ka+iL +A+eY+ksLq TRIDC2AG035600.6 27 VHNQSERKRRDRINEKMKALQELVPHC-----NKSDKASILDEAIEYLKSLQ 73 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 215 aa Download sequence
DADDCEAVNE TRPQRPAAKR RTRAAEVHNQ SERKRRDRIN EKMKALQELV PHCNKSDKAS 60 ILDEAIEYLK SLQLQVQIMW MATGMAPMMY PGAHQLMPPM AMGLNSACMP VAQSLSQLQR 120 VAPFMNHHLP NQMPRVQSPA MDSLNVGNNG VCGEPRNPFL HPGNTLTAAS QVTTTQHNKT 180 RIISYCLTLT CQLQDPARHL LLTELEHKTR QFQAR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	19	36	KRRTRAAEVHNQSERKRR
2	32	37	ERKRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59060.1	1e-33	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG035600.6