PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG038990.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 233aa    MW: 25392 Da    PI: 6.1397
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG038990.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.73.8e-123682455
                      HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                      ++ ++Er RR+r+N+++ +Lr ++P+      +K++Ka+i + A+ YI  Lq
  TRIDC2AG038990.1 36 KNIIMERDRRRRLNEKLYNLRGVVPNI-----TKMDKASIIQDAIAYIEALQ 82
                      56689*********************7.....7*****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
EDSLSGLYSC SYDDSSSPDG ASSWSTAMTM ATRASKNIIM ERDRRRRLNE KLYNLRGVVP  60
NITKMDKASI IQDAIAYIEA LQEQERQLLA EISDLEPDNC TAMVKAEDVA SVGSQAEEDG  120
VGLPRRKKMR RTSSASSVND AITSPATYPV EILELEVTNV AEKLSVVSLR HGKARDAMAK  180
VCGALQSLCL KVITASVTTV AGSMVHTMFI QTEGMDGART IKELIQVALH HLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.23e-43bHLH family protein