PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG040690.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 260aa    MW: 27744.6 Da    PI: 5.6887
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG040690.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.34.1e-11114158655
                       HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          Er+RR r+++++ eLr l+P+      +K++Ka+i   Av Y+k+Lq
  TRIDC2AG040690.2 114 IVSERKRRFRMKEKLYELRALVPNI-----TKMDKASIIADAVAYVKNLQ 158
                       568*********************7.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
PMHFHGDDAG FLAVQPAADD GAWMEDLMHL GDELFGGGGG GGGAGDDNDM VGASAAADQA  60
WRQECEGASP DDHPCSYDDV ISPVSGEQGA GFEPSRDDSD LSGTRKRRDR SKTIVSERKR  120
RFRMKEKLYE LRALVPNITK MDKASIIADA VAYVKNLQSH ARKLKEDVAT LEARPGLAGR  180
RQQLQQKQGR RHGRNGGDDE GNSGSSRGGG GARVTLVSAA QVGEGRFFVT VECERRDGVA  240
APLCAAVESL AGFRLQTSDT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1105121RKRRDRSKTIVSERKRR
2106122RKRRDRSKTIVSERKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.12e-32bHLH family protein