PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG040950.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 246aa MW: 26416.1 Da PI: 8.4966

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG040950.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	39.4	1.1e-12	134	220	5	95
-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE..EEE CS B3 5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefelvvk 95 +s+v + ++v+p++ + +k +++ tlt +grsWe+++ ++++ l++GW++F+ +n L+ gD +vF+l+ + ++ ++v+ TRIDC2AG040950.1 134 VCKSHVQQPFQVVVPRSMVPFLPSK-PTPATLT---WQGRSWEMRF--TGGRHIQRLEAGWRGFALDNALRLGDGCVFELVgCDgEGIVFRVQ 220 5678888899999999999666544.4554555...699*****..88888889*********************99444444445555 PP

Sequence ? help Back to Top
Protein Sequence Length: 246 aa Download sequence
NTSQPPNTST AESEDAASPG TLSRRRLWLL PLSSIPFSSQ IPAMAEPIPA DSSIMVTPPV 60 YRRRNPSSES RGISNAGGKD HGVASSTGET SQAAISAGPP DKLDPESAKA CLEVEKTHPR 120 ILPLLGKAYF ACVVCKSHVQ QPFQVVVPRS MVPFLPSKPT PATLTWQGRS WEMRFTGGRH 180 IQRLEAGWRG FALDNALRLG DGCVFELVGC DGEGIVFRVQ VLRAEIPASI RERAGGYTPS 240 SAIVLD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33280.1	1e-06	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG040950.1