PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG040950.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 221aa MW: 23859.4 Da PI: 8.7618

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG040950.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	39.7	8.5e-13	109	196	5	96
-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE..EEE CS B3 5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefelvvk 95 +s+v + ++v+p++ + +k +++ tlt +grsWe+++ ++++ l++GW++F+ +n L+ gD +vF+l+ + ++ ++v+ TRIDC2AG040950.2 109 VCKSHVQQPFQVVVPRSMVPFLPSK-PTPATLT---WQGRSWEMRF--TGGRHIQRLEAGWRGFALDNALRLGDGCVFELVgCDgEGIVFRVQ 195 5678888999999999999666544.4554555...699*****..88888889*********************99444444445555 PP E CS B3 96 v 96 v TRIDC2AG040950.2 196 V 196 5 PP

Sequence ? help Back to Top
Protein Sequence Length: 221 aa Download sequence
RLWLLPLSSI PFSSQIPAMA EPIPADSSIM VTPPVYRRRN PSSESRGISN AGGKDHGVAS 60 STGETSQAAI SAGPPDKLDP ESAKACLEVE KTHPRILPLL GKAYFACVVC KSHVQQPFQV 120 VVPRSMVPFL PSKPTPATLT WQGRSWEMRF TGGRHIQRLE AGWRGFALDN ALRLGDGCVF 180 ELVGCDGEGI VFRVQVLRAE IPASIRERAG GYTPSSAIVL D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33280.1	7e-07	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG040950.2