PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG041900.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 261aa    MW: 27584 Da    PI: 4.345
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG041900.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.92.5e-184090155
               AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      ++y GVr+++ +gr++AeIrdp +   + r++lg+f+taeeAa a+++a+++l+g
  TRIDC2AG041900.1 40 TRYLGVRRRP-WGRYAAEIRDPAT---KDRHWLGTFDTAEEAAVAYDRAARSLRG 90
                      5799******.**********843...4*************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MNFSSYFSSS SSSSSSSDKK SSSSKRRQQA AQQQPDSNPT RYLGVRRRPW GRYAAEIRDP  60
ATKDRHWLGT FDTAEEAAVA YDRAARSLRG VRARTNFAYP DLPPGSSITP YLSPDLTSDD  120
NAVQLLQPFY ADPVPPLPTH QPAAGGGGQD IGSEYLYGGA PDMSSLMDDI AMPDDLPMID  180
GGGDMDFCMY GVGGNGANAA GGGGWCDASE LGAYSSTPGG GHGVYFEEGY VHSPLFSPMP  240
AADDAGADGF QLGGSSSSYY Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13910.18e-31ERF family protein