PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG044670.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 235aa    MW: 27120.2 Da    PI: 8.5335
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG044670.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH18.73e-06180200426
                       ---SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH   4 elCrffartGtCkyGdrCkFaHg 26 
                       e Cr++++   C++ ++C+FaH+
  TRIDC2AG044670.1 180 EVCRDYLK-KMCNR-ESCRFAHP 200
                       89******.*****.*******9 PP
2zf-CCCH20.96.2e-07210232226
                       -S---SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHg 26 
                       k e Cr+f r G+C + ++C+F H+
  TRIDC2AG044670.1 210 KVEVCRDFKR-GECTR-PTCRFYHP 232
                       89********.*****.*******8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
RDYLRDRCTR SDLECKYAHP HQSVSVDRDS KVTACADSLR NNCFRGRTCR YYHPPPHIQE  60
SLLRSIGLDV PQVKTVCRDF ARGRCSRSAN ECRFLHHSSV QECAIVCQDF LRGRCERISC  120
RYTHVIAQPM LPPPMRDVPM QMPYPEMVYM PPPPPPLGVP MMAPPLSPPR GFADNKNTVE  180
VCRDYLKKMC NRESCRFAHP DSQTEVAHDK VEVCRDFKRG ECTRPTCRFY HPSSS