PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG044670.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 242aa    MW: 27852 Da    PI: 8.3261
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG044670.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH18.73.2e-06187207426
                       ---SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH   4 elCrffartGtCkyGdrCkFaHg 26 
                       e Cr++++   C++ ++C+FaH+
  TRIDC2AG044670.3 187 EVCRDYLK-KMCNR-ESCRFAHP 207
                       89******.*****.*******9 PP
2zf-CCCH20.96.5e-07217239226
                       -S---SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHg 26 
                       k e Cr+f r G+C + ++C+F H+
  TRIDC2AG044670.3 217 KVEVCRDFKR-GECTR-PTCRFYHP 239
                       89********.*****.*******8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
DLTVEACRDY LRDRCTRSDL ECKYAHPHQS VSVDRDSKVT ACADSLRNNC FRGRTCRYYH  60
PPPHIQESLL RSIGLDVPQV KTVCRDFARG RCSRSANECR FLHHSSVQEC AIVCQDFLRG  120
RCERISCRYT HVIAQPMLPP PMRDVPMQMP YPEMVYMPPP PPPLGVPMMA PPLSPPRGFA  180
DNKNTVEVCR DYLKKMCNRE SCRFAHPDSQ TEVAHDKVEV CRDFKRGECT RPTCRFYHPS  240
SS