PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG045060.7
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 205aa    MW: 23033.3 Da    PI: 10.1414
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG045060.7genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B377.51.4e-2422123199
                       EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                       f+k+lt sd++++g +++ +++aee+      ++++++ ++l+ +d++g  W +++i+r++++r++lt+GW+ Fv++++L +gD ++F   + 
  TRIDC2AG045060.7  22 FCKTLTASDTSTHGGFSVLRRHAEEClppldmSQNPPC-QELVAKDLHGTDWHFRHIFRGQPRRHLLTTGWSVFVSSKRLVAGDAFIFL--RG 111
                       99*****************************7556666.59************************************************..44 PP

                       SEE..EEEEE-S CS
                B3  88 sefelvvkvfrk 99 
                       +++el+v+v+r+
  TRIDC2AG045060.7 112 ENGELRVGVRRH 123
                       9999******96 PP
2Auxin_resp74.92.2e-25148205158
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserr 58 
                       a+ha+st++ F+v+Y+Pr+s+seFvv+v+k+++a k+++svGmRfkm+fe++++ err
  TRIDC2AG045060.7 148 ASHAISTGTLFSVFYKPRTSQSEFVVSVNKYLEAKKQNISVGMRFKMKFEGDEALERR 205
                       789***************************************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
QGELTSLGPE PKELEKGTIH SFCKTLTASD TSTHGGFSVL RRHAEECLPP LDMSQNPPCQ  60
ELVAKDLHGT DWHFRHIFRG QPRRHLLTTG WSVFVSSKRL VAGDAFIFLR GENGELRVGV  120
RRHMRQVNNM PSSVISSHSM HLGVLATASH AISTGTLFSV FYKPRTSQSE FVVSVNKYLE  180
AKKQNISVGM RFKMKFEGDE ALERR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59750.11e-121ARF family protein