PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG045060.8
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 165aa    MW: 18291 Da    PI: 11.0714
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG045060.8genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B336.58.6e-126515299
                      .EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3 52 yrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                      + ++++r++lt+GW+ Fv++++L +gD ++F   + +++el+v+v+r+
  TRIDC2AG045060.8  6 FGGQPRRHLLTTGWSVFVSSKRLVAGDAFIFL--RGENGELRVGVRRH 51
                      467899**************************..449999******96 PP
2Auxin_resp102.36e-3476161183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsd...ldpvrWpnSkWrsLk 83 
                       a+ha+st++ F+v+Y+Pr+s+seFvv+v+k+++a k+++svGmRfkm+fe++++ err+sGt++g+     ++++ W +S W+sLk
  TRIDC2AG045060.8  76 ASHAISTGTLFSVFYKPRTSQSEFVVSVNKYLEAKKQNISVGMRFKMKFEGDEALERRFSGTIIGIGStptVSTSLWADSDWKSLK 161
                       789**************************************************************98622256678********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    
IFVTYFGGQP RRHLLTTGWS VFVSSKRLVA GDAFIFLRGE NGELRVGVRR HMRQVNNMPS  60
SVISSHSMHL GVLATASHAI STGTLFSVFY KPRTSQSEFV VSVNKYLEAK KQNISVGMRF  120
KMKFEGDEAL ERRFSGTIIG IGSTPTVSTS LWADSDWKSL KGPMG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59750.13e-85ARF family protein