PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG045130.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 407aa MW: 46862.9 Da PI: 6.6689

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG045130.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	57.2	5.4e-18	49	142	2	90
FAR1 2 fYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHel 89 Y+ +Ak++GFs+r+++++ + + t+r fvC + g++ + + k++r+r+++r+gC+a l++ ++ +w+vt +++ HnHel TRIDC2AG045130.3 49 LYSGFAKQCGFSIRRHRTEGKdGVGKGLTRRYFVCHRAGNTPAKPFDdGAKQQRNRKSSRCGCQAYLRIGRDAgagGLEWRVTGFSNYHNHEL 141 79**********9998877356667999*****998887664678899*************99877789***********9 PP FAR1 90 a 90 TRIDC2AG045130.3 142 L 142 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
MERPSSGEEG EGDSPNETRI SPETAAAEAD DSVPYIGQRF LTHEAAYELY SGFAKQCGFS 60 IRRHRTEGKD GVGKGLTRRY FVCHRAGNTP AKPFDDGAKQ QRNRKSSRCG CQAYLRIGRD 120 AGAGGLEWRV TGFSNYHNHE LLRQDEVRFL PAYRVISESD RDRILVFAKS GITVQQMMRI 180 MELEKCVQPG SLPFTEKDVR NLIQSFRRFE QEEESVDLLQ MCRNVKEKDP NFKYDFTKDA 240 NNCVENIAWS YASSIQSYEV FGDAVVFDTT HRLTSIDMTL GIWIGMNNHG MPCFLSCVLL 300 REGNLQSFTW ALQVFLNFMN RKAPQTILTD QNMYLKEAVQ KELPNTKHAL SIGLIASRFL 360 SWFNAVLGRH YNDWENEFYR LHNMESTMDF DLGWSDMGWL LCREFQK

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

MERPSSGEEG EGDSPNETRI SPETAAAEAD DSVPYIGQRF LTHEAAYELY SGFAKQCGFS  60
IRRHRTEGKD GVGKGLTRRY FVCHRAGNTP AKPFDDGAKQ QRNRKSSRCG CQAYLRIGRD  120
AGAGGLEWRV TGFSNYHNHE LLRQDEVRFL PAYRVISESD RDRILVFAKS GITVQQMMRI  180
MELEKCVQPG SLPFTEKDVR NLIQSFRRFE QEEESVDLLQ MCRNVKEKDP NFKYDFTKDA  240
NNCVENIAWS YASSIQSYEV FGDAVVFDTT HRLTSIDMTL GIWIGMNNHG MPCFLSCVLL  300
REGNLQSFTW ALQVFLNFMN RKAPQTILTD QNMYLKEAVQ KELPNTKHAL SIGLIASRFL  360
SWFNAVLGRH YNDWENEFYR LHNMESTMDF DLGWSDMGWL LCREFQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	0.0	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG045130.3