PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG045600.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Trihelix
Protein Properties Length: 325aa    MW: 36040.4 Da    PI: 8.902
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG045600.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix27.86.8e-093652186
          trihelix 21 lrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
                      l+rg+l+ p+W+ev++++       +  +s +qCk++++ l+k+yk +++   +       +++++d+l+
  TRIDC2AG045600.1  3 LGRGSLRHPQWQEVAEAVssrdNYSKAPKSDVQCKNRIDTLKKKYKIERAKPVS-------SWQFYDRLD 65
                      67999*************84444445566889**************99887765.......589998886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    
VALGRGSLRH PQWQEVAEAV SSRDNYSKAP KSDVQCKNRI DTLKKKYKIE RAKPVSSWQF  60
YDRLDVLLAP TYNQKPAAHP NGRNAVPTAL RAGFPQRSRT PLMPASAPVK RRAPSPELSA  120
SSESSDGFPP EPALPAANGK RRRTDEGRVD GFSGGDRSQG MRELAQALRR FGEAYERVET  180
AKLEQAAEIE RQRLDFAREL ESQRVQFFLN TQKELSQGKS HISPAAAASH SQVGAATVGG  240
SSRRMASAPD STSRRMAPFP DARTSSNHHD RYRASDGSRH HHRPAVRPHY QYHENNMADS  300
AAASDGEQSG DEEEEEDDDN EEESQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11100.19e-30Trihelix family protein